There are 379 articles for you to read.

Processing for Data_Marius_16S_2025

Author: gene_x

Abstract: 1. Target 16sRNAseq Analyse - Legend Groups * (1) A1-A11 male aged 3d post-stroke * (2) B1-B16 female aged 3d post-stroke * (3) C1-C10 female aged BL FMT donor

Data_Tam_DNAseq_2025 NACHREICHEN_2

Author: gene_x

Abstract: > HF samples (Enterobacter hormaechei strain HKEH-1 vs. CP095177, CP095178, CP095179) > Definition: If genome comparison verify the bacterium is Enterobacter hormaechei, we can name it as “Enterobact

Data_Tam_DNAseq_2025 NACHREICHEN_1

Author: gene_x

Abstract: > For Clinical and HF a) Please proceed with SNP and indel calling for both clinical samples. #-- DNAseq_2025_AYE: clinical vs CP149838 (Acinetobacter baumannii strain 2024CK-00130) --

Comprehensive smallRNA-7 profiling using exceRpt pipeline with full reference databases (v2)

Author: gene_x

Abstract: 1. Input data # name condition # ---------------------------------------------- # 0403_WaGa_wt parental_cells_1.fastq.gz # #050

Mapping of reads to selected viruses in DAMIAN results (version 2)

Author: gene_x

Abstract: [![RV4_DNA_on_HSV-2_strain_G_OM370995](/static/images/RV4_DNA_on_HSV-2_strain_G_OM370995.png "RV4_DNA_on_HSV-2_strain_G_OM370995")](/static/images/RV4_DNA_on_HSV-2_strain_G_OM370995.png "RV4_DNA_on_HS

Mapping of reads to selected viruses in DAMIAN results

Author: gene_x

Abstract: 1. Prepare input raw data # -- Ringversuch -- ~/DATA/Data_Damian/241213_VH00358_120_AAG523FM5_Ringversuch ln ../241213_VH00358_120_AAG523FM5_Ringversuch/p20579/01_RV1_DNA_S1_R

H65.3 G and J35.2 G

Author: gene_x

Abstract: > Am 23. Juli um 9 Uhr H65.3 G – Chronischer Seromukotympanon * Das bedeutet: Chronischer Paukenerguss (Flüssigkeit hinter dem Trommelfell, oft ohne akute Entzündung). * Kommt bei Kindern oft

Run the viral-ngs Snakemake pipelines inside a Docker environment

Author: gene_x

Abstract: 1. Pull the viral-ngs Docker Image docker pull quay.io/broadinstitute/viral-ngs docker run -t quay.io/broadinstitute/viral-ngs # Without /bin/bash → May run and exit immedia

Comprehensive smallRNA-7 profiling using exceRpt pipeline with full reference databases

Author: gene_x

Abstract: > TODO_1: Update the image [![mapping_heatmap3](/static/Data_Ute_smallRNA_7/mapping_heatmap3.png "mapping_heatmap3")](/static/Data_Ute_smallRNA_7/mapping_heatmap3.png "mapping_heatmap3") 1. Input da

Small RNA sequencing processing in the example of smallRNA_7 using exceRpt

Author: gene_x

Abstract: 1. Input data mkdir ~/DATA/Data_Ute/Data_Ute_smallRNA_7/raw_data cd raw_data cp ~/DATA/Data_Ute/Data_Ute_smallRNA_7/231016_NB501882_0435_AHG7HMBGXV/nf930/01_0505_WaGa_wt_EV_RNA_S1_R


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